STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975155_00650Unannotated protein. (220 aa)    
Predicted Functional Partners:
GCA_000975155_00262
Unannotated protein.
   
 0.800
GCA_000975155_01272
Unannotated protein.
   
 0.791
GCA_000975155_00649
Unannotated protein.
       0.773
GCA_000975155_00450
Unannotated protein.
  
 0.767
GCA_000975155_01370
Unannotated protein.
     
 0.697
GCA_000975155_00887
Unannotated protein.
    
  0.680
GCA_000975155_00625
Unannotated protein.
    
 0.679
GCA_000975155_01366
Unannotated protein.
   
  0.677
GCA_000975155_01443
Unannotated protein.
    
  0.669
GCA_000975155_01159
Unannotated protein.
     
 0.665
Your Current Organism:
Demequina globuliformis
NCBI taxonomy Id: 676202
Other names: D. globuliformis, Demequina globuliformis Ue et al. 2011, KCTC 19747, MBIC 08349, NBRC 106266, marine actinobacterium YM24-125, strain YM24-125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.