STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975155_00885Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_000975155_00557
Unannotated protein.
 
 0.999
GCA_000975155_01294
Unannotated protein.
  
 0.999
GCA_000975155_00884
Unannotated protein.
  
 
 0.998
GCA_000975155_00875
Unannotated protein.
  
 0.995
GCA_000975155_01658
Unannotated protein.
   
  
 0.985
GCA_000975155_00832
Unannotated protein.
   
 0.956
GCA_000975155_02147
Unannotated protein.
   
 0.906
GCA_000975155_01815
Unannotated protein.
   
 0.905
GCA_000975155_01460
Unannotated protein.
 
 
 0.893
GCA_000975155_00513
Unannotated protein.
  
 0.887
Your Current Organism:
Demequina globuliformis
NCBI taxonomy Id: 676202
Other names: D. globuliformis, Demequina globuliformis Ue et al. 2011, KCTC 19747, MBIC 08349, NBRC 106266, marine actinobacterium YM24-125, strain YM24-125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.