STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975155_01649Unannotated protein. (425 aa)    
Predicted Functional Partners:
GCA_000975155_01650
Unannotated protein.
 
 0.974
GCA_000975155_02004
Unannotated protein.
  
 0.892
GCA_000975155_01475
Unannotated protein.
  
 0.889
GCA_000975155_01685
Unannotated protein.
  
 0.874
GCA_000975155_01943
Unannotated protein.
  
 0.872
GCA_000975155_01360
Unannotated protein.
  
 0.866
GCA_000975155_00418
Unannotated protein.
  
 0.854
GCA_000975155_01684
Unannotated protein.
  
  
 
0.620
GCA_000975155_01233
Unannotated protein.
  
  0.579
GCA_000975155_00325
Unannotated protein.
    
 0.528
Your Current Organism:
Demequina globuliformis
NCBI taxonomy Id: 676202
Other names: D. globuliformis, Demequina globuliformis Ue et al. 2011, KCTC 19747, MBIC 08349, NBRC 106266, marine actinobacterium YM24-125, strain YM24-125
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.