STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG38159.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)    
Predicted Functional Partners:
KRG42371.1
Hypothetical protein; Protects the bacterial cell from host peptidases.
    
 0.988
ARC20_14405
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.982
KRG46011.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.917
KRG43643.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
KRG37809.1
Heat-shock protein Hsp70; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.898
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.887
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.884
KRG45548.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
 
 0.769
KRG45950.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
 
 0.746
KRG37726.1
2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
Your Current Organism:
Stenotrophomonas panacihumi
NCBI taxonomy Id: 676599
Other names: JCM 16536, KCTC 22893, KEMB 9004-002, KEMB:9004-002, S. panacihumi, Stenotrophomonas sp. MK06, strain MK06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.