STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG37351.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)    
Predicted Functional Partners:
KRG47829.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.918
KRG46879.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.693
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.536
KRG37476.1
RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.496
KRG42986.1
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.494
KRG42308.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.494
KRG43670.1
E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.488
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
   0.482
KRG42839.1
Molybdopterin biosynthesis protein MoeB; ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.468
ARC20_14405
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.468
Your Current Organism:
Stenotrophomonas panacihumi
NCBI taxonomy Id: 676599
Other names: JCM 16536, KCTC 22893, KEMB 9004-002, KEMB:9004-002, S. panacihumi, Stenotrophomonas sp. MK06, strain MK06
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