STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_26381Integral membrane protein. (118 aa)    
Predicted Functional Partners:
RF55_26553
Peroxisomal membrane protein PEX16.
  
     0.523
RF55_26297
Bzip transcription factor.
  
     0.515
RF55_25249
Dna repair metallo-beta-lactamase.
  
     0.501
RF55_25831
Uncharacterized protein.
  
     0.498
RF55_24801
Caib baif family enzyme.
  
     0.470
RF55_26063
Autophagy-related protein 28.
  
     0.463
RF55_25432
Prefoldin subunit.
  
     0.455
RF55_26384
PHM7_ext domain-containing protein.
  
     0.454
RF55_25771
Uncharacterized protein.
  
     0.453
RF55_26576
Cap-gly and leucine rich repeat domain protein.
  
     0.439
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.