STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_23194Fatty acid synthase. (110 aa)    
Predicted Functional Partners:
RF55_5517
Putative malonyl--acyl carrier protein mitochondrial-like protein.
  
 0.646
RF55_5243
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
   
 0.636
RF55_16611
Tyrocidine synthetase 3.
  
 0.610
RF55_9744
Hydroxysteroid dehydrogenase-like protein 2 protein.
   
 0.607
RF55_26198
Peptide synthetase.
  
 0.595
RF55_17436
Peptide synthase.
  
 0.595
RF55_8037
Atp-citrate synthase.
   
 0.579
RF55_4409
Putative trans-2-enoyl-mitochondrial-like protein.
   
  0.527
RF55_18667
Fatty acid synthase.
 
     0.525
RF55_25101
Fatty acid synthase.
 
     0.522
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.