STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_21138Reverse transcriptase. (404 aa)    
Predicted Functional Partners:
RF55_6812
Reverse transcriptase.
  
     0.488
RF55_4444
Reverse.
  
     0.452
RF55_10410
Lian-aa1 retrotransposon protein.
  
     0.448
RF55_10826
Reverse.
  
     0.444
RF55_15173
Reverse transcriptase.
  
     0.438
RF55_9550
Reverse.
  
     0.437
RF55_14758
Rna-directed dna polymerase from mobile element jockey-like protein.
  
     0.422
RF55_11041
Reverse transcriptase.
  
     0.422
RF55_23925
Reverse.
  
     0.420
RF55_14170
Pol-like protein.
  
     0.415
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.