STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_19939Lipoyl synthase. (99 aa)    
Predicted Functional Partners:
RF55_11706
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
 
 
 0.822
RF55_2803
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
 
 
 0.808
RF55_7005
Abhydrolase domain-containing protein 12.
  
 
 0.772
RF55_12918
Lipoyltransferase mitochondrial.
  
 
 0.772
RF55_4464
Nitrilase and fragile histidine triad fusion protein hit.
  
 
 0.544
RF55_6353
Iron transporter.
  
 
 0.490
RF55_15221
Vanin-like protein 1 protein.
  
 
 0.481
RF55_2366
Beta-ureidopropionase-like isoform 1 protein.
  
 
 0.481
RF55_2621
Nitrilase 1-like protein.
  
 
 0.481
RF55_22547
Udp-n-acetylglucosamine acyltransferase.
  
  
 0.469
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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