Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF55_16876 | RF55_2329 | A0A0J7K3K9 | A0A0J7L3A7 | Zinc finger protein 687. | General transcription factor 3c polypeptide 3-like protein. | 0.524 |
RF55_16876 | RF55_3197 | A0A0J7K3K9 | A0A0J7L148 | Zinc finger protein 687. | Brca1-associated ring domain protein 1-like protein. | 0.526 |
RF55_16876 | RF55_3524 | A0A0J7K3K9 | A0A0J7L0A6 | Zinc finger protein 687. | Suppressor of fused-like protein. | 0.522 |
RF55_16876 | RF55_4734 | A0A0J7K3K9 | A0A0J7KXP6 | Zinc finger protein 687. | Leucine-rich repeat serine threonine-protein kinase 1-like protein. | 0.678 |
RF55_16876 | RF55_572 | A0A0J7K3K9 | A0A0J7P3X3 | Zinc finger protein 687. | Protein roadkill-like protein. | 0.512 |
RF55_16876 | RF55_5996 | A0A0J7K3K9 | A0A0J7NMX9 | Zinc finger protein 687. | Integrator complex subunit 1-like protein. | 0.772 |
RF55_16876 | RF55_7338 | A0A0J7K3K9 | A0A0J7NJI1 | Zinc finger protein 687. | Putative atp-dependent rna helicase dhx34. | 0.533 |
RF55_16876 | RF55_7390 | A0A0J7K3K9 | A0A0J7NJC2 | Zinc finger protein 687. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | 0.515 |
RF55_16876 | RF55_901 | A0A0J7K3K9 | A0A0J7L8E8 | Zinc finger protein 687. | Integrator complex subunit 5. | 0.773 |
RF55_16876 | RF55_9884 | A0A0J7K3K9 | A0A0J7KJD7 | Zinc finger protein 687. | Integrator complex subunit 3. | 0.775 |
RF55_2329 | RF55_16876 | A0A0J7L3A7 | A0A0J7K3K9 | General transcription factor 3c polypeptide 3-like protein. | Zinc finger protein 687. | 0.524 |
RF55_3197 | RF55_16876 | A0A0J7L148 | A0A0J7K3K9 | Brca1-associated ring domain protein 1-like protein. | Zinc finger protein 687. | 0.526 |
RF55_3197 | RF55_4734 | A0A0J7L148 | A0A0J7KXP6 | Brca1-associated ring domain protein 1-like protein. | Leucine-rich repeat serine threonine-protein kinase 1-like protein. | 0.938 |
RF55_3197 | RF55_7338 | A0A0J7L148 | A0A0J7NJI1 | Brca1-associated ring domain protein 1-like protein. | Putative atp-dependent rna helicase dhx34. | 0.614 |
RF55_3524 | RF55_16876 | A0A0J7L0A6 | A0A0J7K3K9 | Suppressor of fused-like protein. | Zinc finger protein 687. | 0.522 |
RF55_3524 | RF55_4734 | A0A0J7L0A6 | A0A0J7KXP6 | Suppressor of fused-like protein. | Leucine-rich repeat serine threonine-protein kinase 1-like protein. | 0.556 |
RF55_3524 | RF55_572 | A0A0J7L0A6 | A0A0J7P3X3 | Suppressor of fused-like protein. | Protein roadkill-like protein. | 0.909 |
RF55_4734 | RF55_16876 | A0A0J7KXP6 | A0A0J7K3K9 | Leucine-rich repeat serine threonine-protein kinase 1-like protein. | Zinc finger protein 687. | 0.678 |
RF55_4734 | RF55_3197 | A0A0J7KXP6 | A0A0J7L148 | Leucine-rich repeat serine threonine-protein kinase 1-like protein. | Brca1-associated ring domain protein 1-like protein. | 0.938 |
RF55_4734 | RF55_3524 | A0A0J7KXP6 | A0A0J7L0A6 | Leucine-rich repeat serine threonine-protein kinase 1-like protein. | Suppressor of fused-like protein. | 0.556 |
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