Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF55_10657 | RF55_11415 | A0A0J7NAP6 | A0A0J7N8N1 | Fanconi anemia group m protein. | Retrotransposon expressed. | 0.664 |
RF55_10657 | RF55_14653 | A0A0J7NAP6 | A0A0J7K832 | Fanconi anemia group m protein. | Retrovirus-related pol polyprotein from transposon tnt 1-94. | 0.664 |
RF55_11415 | RF55_10657 | A0A0J7N8N1 | A0A0J7NAP6 | Retrotransposon expressed. | Fanconi anemia group m protein. | 0.664 |
RF55_11415 | RF55_14417 | A0A0J7N8N1 | A0A0J7K8B5 | Retrotransposon expressed. | Zinc knuckle protein. | 0.445 |
RF55_11415 | RF55_14653 | A0A0J7N8N1 | A0A0J7K832 | Retrotransposon expressed. | Retrovirus-related pol polyprotein from transposon tnt 1-94. | 0.425 |
RF55_12887 | RF55_14653 | A0A0J7KBK8 | A0A0J7K832 | Integrase core domain protein. | Retrovirus-related pol polyprotein from transposon tnt 1-94. | 0.472 |
RF55_14417 | RF55_11415 | A0A0J7K8B5 | A0A0J7N8N1 | Zinc knuckle protein. | Retrotransposon expressed. | 0.445 |
RF55_14417 | RF55_14653 | A0A0J7K8B5 | A0A0J7K832 | Zinc knuckle protein. | Retrovirus-related pol polyprotein from transposon tnt 1-94. | 0.405 |
RF55_14653 | RF55_10657 | A0A0J7K832 | A0A0J7NAP6 | Retrovirus-related pol polyprotein from transposon tnt 1-94. | Fanconi anemia group m protein. | 0.664 |
RF55_14653 | RF55_11415 | A0A0J7K832 | A0A0J7N8N1 | Retrovirus-related pol polyprotein from transposon tnt 1-94. | Retrotransposon expressed. | 0.425 |
RF55_14653 | RF55_12887 | A0A0J7K832 | A0A0J7KBK8 | Retrovirus-related pol polyprotein from transposon tnt 1-94. | Integrase core domain protein. | 0.472 |
RF55_14653 | RF55_14417 | A0A0J7K832 | A0A0J7K8B5 | Retrovirus-related pol polyprotein from transposon tnt 1-94. | Zinc knuckle protein. | 0.405 |