STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_14226Protein transport protein sec61 subunit alpha isoform 2. (476 aa)    
Predicted Functional Partners:
RF55_8936
Tyrosine-protein phosphatase non-receptor type 14; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.999
RF55_4578
60s ribosomal protein l23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
RF55_13645
40s ribosomal protein s15a; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.998
RF55_10436
60s ribosomal protein l35.
  
 
 0.998
RF55_10163
60s ribosomal protein l7.
  
 
 0.998
RF55_6543
60s ribosomal protein l27a; Belongs to the universal ribosomal protein uL15 family.
  
 
 0.998
RF55_5547
Translocation protein sec63-like protein.
   
 
 0.998
RF55_4316
40s ribosomal protein s3.
  
 
 0.998
RF55_3836
40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.998
RF55_11627
28s ribosomal protein mitochondrial.
  
 
 0.998
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.