STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_14139Titin-like protein. (644 aa)    
Predicted Functional Partners:
RF55_10676
Myosin regulatory light chain 2-like protein.
   
 0.840
RF55_1599
Wd repeat-containing protein 18-like protein.
   
 0.835
RF55_5798
Calmodulin-like protein 4 protein.
    
 0.824
RF55_11258
Myosin light chain smooth muscle; Belongs to the protein kinase superfamily.
 
 
 0.804
RF55_12932
Alpha-sarcomeric.
   
 0.800
RF55_3186
Alpha-sarcomeric.
   
 0.800
RF55_13346
Calmodulin isoform x1; Belongs to the calmodulin family.
    
 0.792
RF55_3451
Calponin homology domain-containing protein.
    
 0.792
RF55_2101
Calmodulin-like isoform x3 protein; Belongs to the calmodulin family.
    
 0.792
RF55_2038
Myosin light chain alkali-like isoform x1 protein.
   
 0.786
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.