STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_13418Fibronectin type iii and spry domain-containing protein 1. (276 aa)    
Predicted Functional Partners:
RF55_1790
Robl_LC7 domain-containing protein.
   
 0.990
RF55_10861
Ragulator complex protein lamtor1-like protein.
   
 0.990
RF55_9517
Protein hbxip-like protein.
   
 0.989
RF55_9116
Regulatory-associated protein of mtor.
    
 0.964
RF55_1814
Tumor suppressor candidate 4.
   
 0.885
RF55_8549
Folliculin-like isoform 1 protein.
    
 0.851
RF55_4042
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.845
RF55_8724
Target of rapamycin complex subunit lst8-like protein.
    
 0.831
RF55_9965
Dep domain-containing protein 5.
    
 0.788
RF55_5385
Dep domain-containing protein 5-like protein.
    
 0.788
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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