STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_13440Fork head domain-containing protein fd3. (382 aa)    
Predicted Functional Partners:
RF55_11292
Putative sulfite mitochondrial-like protein; Belongs to the cytochrome b5 family.
     
 0.812
RF55_8146
Creb-binding protein.
    
 0.782
RF55_1119
Non-specific serine/threonine protein kinase.
    
 0.758
RF55_61
Mothers against decapentaplegic homolog.
    
 0.718
RF55_8025
Transcription factor rfx3.
    
 
 0.681
RF55_8091
Protein phosphatase pp2a 55 kDa regulatory subunit-like isoform 2 protein.
    
  0.680
RF55_6708
Transmembrane protein 173.
    
  0.677
RF55_11263
Histone H3; Belongs to the histone H3 family.
   
 0.676
RF55_6318
Histone H3; Belongs to the histone H3 family.
   
 0.676
RF55_3070
Myeloid differentiation primary response protein 88.
   
 0.676
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.