STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_12493Rna pseudouridylate synthase domain-containing protein 1. (97 aa)    
Predicted Functional Partners:
RF55_5303
Protein c7orf30-like protein.
  
 
 0.880
RF55_7675
Pseudouridylate synthase 7-like protein.
    
 
 0.847
RF55_3497
39s ribosomal protein mitochondrial.
   
   0.845
RF55_6543
60s ribosomal protein l27a; Belongs to the universal ribosomal protein uL15 family.
  
   0.837
RF55_4161
Rna methyltransferase-like protein 1-like protein.
  
 
 0.827
RF55_10047
50s ribosomal protein l13.
  
   0.807
RF55_10206
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.805
RF55_16977
tRNA pseudouridine synthase.
  
  
 0.708
RF55_3947
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.702
RF55_25200
Gtp-binding protein der.
   
 
 0.694
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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