STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_12324Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
RF55_13163
Uncharacterized protein.
  
     0.477
RF55_8424
Uncharacterized protein.
  
     0.445
RF55_14970
Peptidase A2 domain-containing protein.
  
     0.443
RF55_12297
Bel12-ag transposon polyprotein.
  
     0.442
RF55_18106
Peptidase A2 domain-containing protein.
  
     0.440
RF55_11921
DUF1758 domain-containing protein.
  
     0.436
RF55_12815
Gag-pol polyprotein.
  
     0.435
RF55_17540
DUF1758 domain-containing protein.
  
     0.433
RF55_15095
Peptidase A2 domain-containing protein.
  
     0.433
RF55_14122
Gag-pol protein.
  
     0.433
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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