STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_10666Grip and coiled-coil domain-containing protein. (449 aa)    
Predicted Functional Partners:
RF55_8562
Rna-binding protein nob1.
   
 0.996
RF55_2183
Bystin isoform 1.
   
 0.996
RF55_823
Serine threonine-protein kinase rio2.
   
 0.994
RF55_7464
Pre-rrna-processing protein tsr1-like protein.
   
 0.991
RF55_26320
Pre-rrna processing protein.
   
 0.980
RF55_18918
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.980
RF55_4316
40s ribosomal protein s3.
   
 0.979
RF55_4063
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.979
RF55_15631
40s ribosomal protein s10.
    
 0.977
RF55_1826
40s ribosomal protein s20-like protein.
    
 0.977
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.