STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_10649Centromere-associated protein e-like protein. (582 aa)    
Predicted Functional Partners:
RF55_4734
Leucine-rich repeat serine threonine-protein kinase 1-like protein.
    
 0.716
RF55_9631
Nucleoporin gle1.
    
 0.690
RF55_1743
Histone chaperone asf1.
    
 0.680
RF55_13645
40s ribosomal protein s15a; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.632
RF55_3836
40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
   
   0.604
RF55_229
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.598
RF55_13054
Ubinuclein-1-like isoform x3 protein.
    
 0.588
RF55_12274
40s ribosomal protein s11; Belongs to the universal ribosomal protein uS17 family.
   
   0.586
RF55_16471
Coproporphyrinogen iii oxidase.
   
   0.580
RF55_4063
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.580
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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