STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
e(y)2Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)    
Predicted Functional Partners:
RF55_10511
Ubiquitin carboxyl-terminal hydrolase 22-like protein; Belongs to the peptidase C19 family.
    
 0.994
RF55_2374
Saga-associated factor 29-like protein.
   
 0.991
RF55_6292
Ataxin-7-like protein 1 protein.
    
 0.990
RF55_6361
Transcription initiation factor tfiid subunit 12-like protein.
   
 0.989
RF55_9021
Protein xmas-2.
    
 
 0.988
RF55_106
Transcriptional adapter 3-b-like protein.
    
 0.984
RF55_5409
Transcription initiation factor tfiid subunit 6-like protein.
    
 0.983
RF55_10517
Transcription initiation factor tfiid subunit 9-like protein.
   
 0.982
RF55_16311
Transcription initiation protein spt3-like protein.
    
 0.979
RF55_1028
Transcription initiation factor tfiid subunit 6.
    
 0.977
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.