Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF55_10274 | RF55_11179 | A0A0J7KIC0 | A0A0J7KG05 | Small-conductance mechanosensitive channel. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.754 |
RF55_10274 | RF55_16296 | A0A0J7KIC0 | A0A0J7K4K3 | Small-conductance mechanosensitive channel. | Gamma-glutamyl phosphate reductase. | 0.622 |
RF55_10274 | RF55_2133 | A0A0J7KIC0 | A0A0J7L3R9 | Small-conductance mechanosensitive channel. | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | 0.622 |
RF55_10274 | RF55_22765 | A0A0J7KIC0 | A0A0J7JX48 | Small-conductance mechanosensitive channel. | Cell envelope integrity inner membrane protein. | 0.442 |
RF55_11179 | RF55_10274 | A0A0J7KG05 | A0A0J7KIC0 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Small-conductance mechanosensitive channel. | 0.754 |
RF55_16296 | RF55_10274 | A0A0J7K4K3 | A0A0J7KIC0 | Gamma-glutamyl phosphate reductase. | Small-conductance mechanosensitive channel. | 0.622 |
RF55_16296 | RF55_2133 | A0A0J7K4K3 | A0A0J7L3R9 | Gamma-glutamyl phosphate reductase. | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | 0.998 |
RF55_2133 | RF55_10274 | A0A0J7L3R9 | A0A0J7KIC0 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Small-conductance mechanosensitive channel. | 0.622 |
RF55_2133 | RF55_16296 | A0A0J7L3R9 | A0A0J7K4K3 | Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. | Gamma-glutamyl phosphate reductase. | 0.998 |
RF55_22765 | RF55_10274 | A0A0J7JX48 | A0A0J7KIC0 | Cell envelope integrity inner membrane protein. | Small-conductance mechanosensitive channel. | 0.442 |