STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_10146Stromal membrane-associated protein 1-like protein. (469 aa)    
Predicted Functional Partners:
RF55_152
Arf-gap with rho-gap ank repeat and ph domain-containing protein.
     
 0.888
RF55_5080
Adp-ribosylation factor gtpase-activating protein 2.
    
0.882
RF55_2748
Arf-gap with coiled-ank repeat and ph domain-containing protein 2-like protein.
    
0.876
RF55_412
Phosphatidylinositol-biphosphate-dependent arf1 gtpase-activating protein.
    
0.876
RF55_7108
Centaurin-gamma-1A.
     
0.851
RF55_9797
Arf gtpase-activating protein git1.
     
 0.843
RF55_10695
Kinesin-like protein kif13a protein.
    
 
 0.840
RF55_9228
Kinesin-like protein kif13a protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.840
RF55_7295
Epsin-2 isoform x2.
    
 0.779
RF55_8887
AP complex subunit beta.
    
 
 0.630
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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