STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_9535Meckelin. (202 aa)    
Predicted Functional Partners:
RF55_7081
Putative transmembrane protein 216.
   
 
 0.779
RF55_6061
Coiled-coil and c2 domain-containing protein 2a.
   
 
 0.772
RF55_8882
Zinc finger protein gli2-like isoform x1 protein.
     
 0.762
RF55_1576
Jouberin.
     
 0.762
RF55_11795
B9 domain-containing protein.
     
 0.704
RF55_1704
Tumor protein p73-like protein.
   
 
 0.691
RF55_1573
Methyltransferase-like protein 22-like protein.
     
 0.615
RF55_10369
Ras-related protein rab-11a.
   
 
 0.580
RF55_8625
Guanine nucleotide exchange factor for rab-3a-like protein.
     
 0.542
RF55_236
Intraflagellar transport protein 20-like protein.
    
 0.502
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.