STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_9624T family of potassium channels protein 18; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (343 aa)    
Predicted Functional Partners:
RF55_3168
Two pore potassium channel protein sup-9-like protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
 
0.597
RF55_4469
Osiris 10-like protein.
   
    0.580
RF55_2607
Paired mesoderm homeobox protein 2.
   
    0.568
RF55_4197
T family of potassium channels protein 7-like protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
0.562
RF55_2348
Potassium channel subfamily k member 13.
   
 
 0.558
RF55_2310
Open rectifier potassium channel protein 1; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
0.511
RF55_1684
Potassium voltage-gated channel subfamily kqt member 1; Belongs to the potassium channel family.
     
 0.475
RF55_11661
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
    0.405
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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