STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_9119Proline-rich p65 protein. (426 aa)    
Predicted Functional Partners:
RF55_3197
Brca1-associated ring domain protein 1-like protein.
    
  0.593
RF55_10994
Brisc and brca1-a complex member 1-like protein.
    
  0.524
RF55_10577
Brca1-a complex subunit abraxas.
    
  0.516
RF55_9681
60s ribosomal protein l21.
   
   0.507
RF55_3489
Ubiquitin-40s ribosomal protein s27a-like protein.
    
  0.477
RF55_2378
60s ribosomal protein l13a-like protein.
   
   0.457
RF55_15183
Mpn domain-containing protein.
    
  0.440
RF55_12889
Lys-63-specific deubiquitinase brcc36-like protein.
    
  0.440
RF55_2298
26s proteasome non-atpase regulatory subunit 14.
    
  0.440
RF55_10047
50s ribosomal protein l13.
   
   0.438
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.