STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_9171Protein aar2-like protein. (373 aa)    
Predicted Functional Partners:
RF55_6962
Pre-mrna-processing-splicing factor 8-like protein.
    
 
 0.988
RF55_6627
Putative u5 small nuclear ribonucleoprotein component.
    
 
 0.971
RF55_5911
Sgt1 protein ecdysoneless.
    
 
 0.955
RF55_10434
Protein tssc4.
    
 
 0.947
RF55_13027
Putative atp-dependent rna helicase ddx23; Belongs to the DEAD box helicase family.
    
 
 0.880
RF55_16890
Putative u5 small nuclear ribonucleoprotein helicase.
    
 
 0.770
RF55_6236
Putative u5 small nuclear ribonucleoprotein helicase.
    
 
 0.770
RF55_19498
Putative u5 small nuclear ribonucleoprotein helicase.
    
 
 0.770
RF55_1629
Zinc finger hit domain-containing protein 2-like protein.
    
 
 0.755
RF55_18983
Lin1-like protein.
   
 
 0.749
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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