STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_9048Uncharacterized protein. (389 aa)    
Predicted Functional Partners:
RF55_11179
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.974
RF55_6499
Proliferation-associated protein.
   
 
 0.956
RF55_4182
Eukaryotic translation initiation factor 6-like protein.
   
 
 0.954
RF55_5757
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
 
 0.939
RF55_15784
60s ribosomal protein l24.
    
 
 0.934
RF55_1205
60s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.924
RF55_8936
Tyrosine-protein phosphatase non-receptor type 14; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.923
RF55_4578
60s ribosomal protein l23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.921
RF55_17270
60s ribosomal protein l22.
    
   0.916
RF55_5104
60s ribosomal protein l7a.
   
 
 0.916
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.