STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_7002Protein malvolio. (594 aa)    
Predicted Functional Partners:
RF55_4559
Nedd4 family-interacting protein 1-like protein.
   
 
 0.774
RF55_9392
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
  0.735
RF55_8844
Zinc transporter 9.
   
 
 0.652
RF55_13047
Copper chaperone for superoxide dismutase.
     
 0.580
RF55_6636
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.564
RF55_5375
Mitoferrin-1-like protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.554
RF55_7246
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 0.549
RF55_4734
Leucine-rich repeat serine threonine-protein kinase 1-like protein.
   
 
 0.548
RF55_879
Udp-glucose:glycoprotein glucosyltransferase.
  
  
 0.537
RF55_16304
Deoxyribose-phosphate aldolase.
      
 0.537
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.