STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_6993Tyramine beta-hydroxylase. (368 aa)    
Predicted Functional Partners:
RF55_18402
Aromatic-l-amino-acid decarboxylase.
     
 0.784
RF55_11922
Aromatic-l-amino-acid decarboxylase.
     
 0.784
RF55_17224
Aromatic-l-amino-acid decarboxylase.
     
 0.769
RF55_10014
Aromatic-l-amino-acid decarboxylase.
     
 0.769
RF55_8065
Histidine decarboxylase.
     
 0.696
RF55_7453
Aromatic-l-amino-acid decarboxylase.
     
 0.696
RF55_12674
Histidine decarboxylase.
     
 0.583
RF55_1447
Histidine decarboxylase.
     
 0.583
RF55_26122
Flavin containing polyamine.
     
 0.486
RF55_15620
Spermine oxidase-like protein.
     
 0.486
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.