STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_5840Putative intraflagellar transport protein 122. (942 aa)    
Predicted Functional Partners:
RF55_8414
Wd repeat-containing protein 35-like protein.
  
 0.997
RF55_5664
Wd repeat-containing protein 19.
   
 0.997
RF55_5537
Intraflagellar transport protein 43-like protein.
    
 0.994
RF55_16220
Putative intraflagellar transport protein 140.
  
 0.963
RF55_15405
Tetratricopeptide repeat protein 21b.
  
 0.962
RF55_10769
Putative intraflagellar transport protein 140.
  
 0.960
RF55_10467
Tetratricopeptide repeat protein 21b.
   
 0.951
RF55_18596
Putative intraflagellar transport protein 140.
   
 0.949
RF55_21132
Putative intraflagellar transport protein 140.
   
 0.947
RF55_14188
Putative intraflagellar transport protein 140.
   
 0.933
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.