STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_5541Partitioning-defective 3-like protein b protein. (968 aa)    
Predicted Functional Partners:
RF55_7526
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.990
RF55_18486
Protein kinase c iota type-like protein.
    
 0.988
RF55_5802
Phosphatidylinositol--trisphosphate 3-phosphatase pten.
   
 0.888
RF55_5258
Ras-like gtp-binding protein rho1 isoform x2 protein.
    
 0.800
RF55_11895
Protein kinase shaggy-like protein; Belongs to the protein kinase superfamily.
    
 0.785
RF55_10659
Glycogen synthase kinase-3 beta isoform x2.
    
 0.785
RF55_2171
Patj-like protein.
    
0.772
RF55_2169
Patj-like protein.
    
 0.772
RF55_8560
Protein still isoform sif type 1.
    
 0.771
RF55_8559
Protein still isoform sif type 1.
    
 0.771
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.