Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF55_13110 | RF55_16937 | A0A0J7KBC7 | A0A0J7K3J6 | Ubiquitin-conjugating enzyme e2 g2. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.495 |
RF55_13110 | RF55_3461 | A0A0J7KBC7 | A0A0J7L0V6 | Ubiquitin-conjugating enzyme e2 g2. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.495 |
RF55_13110 | RF55_3489 | A0A0J7KBC7 | A0A0J7L180 | Ubiquitin-conjugating enzyme e2 g2. | Ubiquitin-40s ribosomal protein s27a-like protein. | 0.852 |
RF55_13110 | RF55_5192 | A0A0J7KBC7 | A0A0J7KVY1 | Ubiquitin-conjugating enzyme e2 g2. | E3 ubiquitin-protein ligase rnf8 b. | 0.725 |
RF55_13110 | RF55_667 | A0A0J7KBC7 | A0A0J7L920 | Ubiquitin-conjugating enzyme e2 g2. | Xtp3-transactivated protein. | 0.565 |
RF55_13110 | RF55_7305 | A0A0J7KBC7 | A0A0J7KQV2 | Ubiquitin-conjugating enzyme e2 g2. | Uv excision repair protein rad23-like protein b protein. | 0.715 |
RF55_14850 | RF55_16937 | A0A0J7K7Q7 | A0A0J7K3J6 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.980 |
RF55_14850 | RF55_2622 | A0A0J7K7Q7 | A0A0J7L336 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | Katanin p60 atpase-containing subunit a-like 2-like protein; Belongs to the AAA ATPase family. | 0.537 |
RF55_14850 | RF55_3461 | A0A0J7K7Q7 | A0A0J7L0V6 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.979 |
RF55_14850 | RF55_3489 | A0A0J7K7Q7 | A0A0J7L180 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | Ubiquitin-40s ribosomal protein s27a-like protein. | 0.906 |
RF55_14850 | RF55_5192 | A0A0J7K7Q7 | A0A0J7KVY1 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | E3 ubiquitin-protein ligase rnf8 b. | 0.813 |
RF55_14850 | RF55_667 | A0A0J7K7Q7 | A0A0J7L920 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | Xtp3-transactivated protein. | 0.979 |
RF55_14850 | RF55_6878 | A0A0J7K7Q7 | A0A0J7KRX7 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | Ubx domain-containing protein 1-a-like protein. | 0.988 |
RF55_14850 | RF55_7305 | A0A0J7K7Q7 | A0A0J7KQV2 | Transitional endoplasmic reticulum atpase ter94; Belongs to the AAA ATPase family. | Uv excision repair protein rad23-like protein b protein. | 0.885 |
RF55_14964 | RF55_16937 | A0A0J7N0I6 | A0A0J7K3J6 | Spermatogenesis-associated protein 5. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.980 |
RF55_14964 | RF55_2622 | A0A0J7N0I6 | A0A0J7L336 | Spermatogenesis-associated protein 5. | Katanin p60 atpase-containing subunit a-like 2-like protein; Belongs to the AAA ATPase family. | 0.552 |
RF55_14964 | RF55_3461 | A0A0J7N0I6 | A0A0J7L0V6 | Spermatogenesis-associated protein 5. | Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. | 0.979 |
RF55_14964 | RF55_3489 | A0A0J7N0I6 | A0A0J7L180 | Spermatogenesis-associated protein 5. | Ubiquitin-40s ribosomal protein s27a-like protein. | 0.906 |
RF55_14964 | RF55_5192 | A0A0J7N0I6 | A0A0J7KVY1 | Spermatogenesis-associated protein 5. | E3 ubiquitin-protein ligase rnf8 b. | 0.813 |
RF55_14964 | RF55_667 | A0A0J7N0I6 | A0A0J7L920 | Spermatogenesis-associated protein 5. | Xtp3-transactivated protein. | 0.979 |
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