STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_4684Haloacid dehalogenase-like hydrolase domain-containing protein 2-like protein. (168 aa)    
Predicted Functional Partners:
RF55_5716
Atp synthase subunit mitochondrial.
   
 
 0.912
RF55_9842
Atp synthase subunit mitochondrial.
     
 0.869
RF55_107
Atp synthase lipid-binding mitochondrial; Belongs to the ATPase C chain family.
   
 
 0.856
RF55_13123
Vacuolar atp synthase subunit s1.
     
 0.843
RF55_4799
V-type proton atpase subunit d.
   
 
 0.842
RF55_5274
Atp synthase subunit mitochondrial.
  
 
 0.841
RF55_6286
ATP synthase subunit gamma.
  
 
 0.839
RF55_7246
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
 
 0.837
RF55_7321
V-type proton atpase subunit h-like isoform 2 protein.
   
 
  0.837
RF55_1117
V-type proton atpase 21 kDa proteolipid subunit-like protein; Belongs to the V-ATPase proteolipid subunit family.
   
 
 0.837
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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