STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_4061DUF2012 domain-containing protein. (153 aa)    
Predicted Functional Partners:
RF55_4465
ER membrane protein complex subunit 3.
   
 
 0.978
RF55_1401
Bardet-biedl syndrome 2 protein.
    
 
 0.974
RF55_3100
Er membrane protein complex subunit 1-like isoform x2 protein.
    
 
 0.973
RF55_4365
Tetratricopeptide repeat protein 35-b.
   
 
 0.972
RF55_18784
Snrna-activating protein complex subunit 1.
    
 
 0.780
RF55_7774
Uncharacterized protein.
    
 
 0.780
RF55_1429
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 
  0.737
RF55_8788
Ww domain-binding protein 2.
   
 
  0.731
RF55_9270
Cytochrome b-c1 complex subunit mitochondrial.
   
 
  0.730
RF55_26277
Isoform c.
      
 0.557
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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