Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF55_1401 | RF55_18784 | A0A0J7L6G1 | A0A0J7K0F6 | Bardet-biedl syndrome 2 protein. | Snrna-activating protein complex subunit 1. | 0.775 |
RF55_1401 | RF55_3100 | A0A0J7L6G1 | A0A0J7L1G5 | Bardet-biedl syndrome 2 protein. | Er membrane protein complex subunit 1-like isoform x2 protein. | 0.973 |
RF55_1401 | RF55_4061 | A0A0J7L6G1 | A0A0J7KZH0 | Bardet-biedl syndrome 2 protein. | DUF2012 domain-containing protein. | 0.974 |
RF55_1401 | RF55_4365 | A0A0J7L6G1 | A0A0J7KYJ5 | Bardet-biedl syndrome 2 protein. | Tetratricopeptide repeat protein 35-b. | 0.973 |
RF55_1401 | RF55_4465 | A0A0J7L6G1 | A0A0J7KYG3 | Bardet-biedl syndrome 2 protein. | ER membrane protein complex subunit 3. | 0.971 |
RF55_1401 | RF55_7774 | A0A0J7L6G1 | A0A0J7KPR8 | Bardet-biedl syndrome 2 protein. | Uncharacterized protein. | 0.775 |
RF55_1429 | RF55_4061 | A0A0J7L6S3 | A0A0J7KZH0 | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | DUF2012 domain-containing protein. | 0.737 |
RF55_1429 | RF55_8788 | A0A0J7L6S3 | A0A0J7KM43 | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | Ww domain-binding protein 2. | 0.979 |
RF55_1429 | RF55_9270 | A0A0J7L6S3 | A0A0J7NEG4 | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | Cytochrome b-c1 complex subunit mitochondrial. | 0.999 |
RF55_18784 | RF55_1401 | A0A0J7K0F6 | A0A0J7L6G1 | Snrna-activating protein complex subunit 1. | Bardet-biedl syndrome 2 protein. | 0.775 |
RF55_18784 | RF55_3100 | A0A0J7K0F6 | A0A0J7L1G5 | Snrna-activating protein complex subunit 1. | Er membrane protein complex subunit 1-like isoform x2 protein. | 0.911 |
RF55_18784 | RF55_4061 | A0A0J7K0F6 | A0A0J7KZH0 | Snrna-activating protein complex subunit 1. | DUF2012 domain-containing protein. | 0.780 |
RF55_18784 | RF55_4365 | A0A0J7K0F6 | A0A0J7KYJ5 | Snrna-activating protein complex subunit 1. | Tetratricopeptide repeat protein 35-b. | 0.951 |
RF55_18784 | RF55_4465 | A0A0J7K0F6 | A0A0J7KYG3 | Snrna-activating protein complex subunit 1. | ER membrane protein complex subunit 3. | 0.926 |
RF55_26277 | RF55_4061 | A0A0J7JTB5 | A0A0J7KZH0 | Isoform c. | DUF2012 domain-containing protein. | 0.557 |
RF55_3100 | RF55_1401 | A0A0J7L1G5 | A0A0J7L6G1 | Er membrane protein complex subunit 1-like isoform x2 protein. | Bardet-biedl syndrome 2 protein. | 0.973 |
RF55_3100 | RF55_18784 | A0A0J7L1G5 | A0A0J7K0F6 | Er membrane protein complex subunit 1-like isoform x2 protein. | Snrna-activating protein complex subunit 1. | 0.911 |
RF55_3100 | RF55_4061 | A0A0J7L1G5 | A0A0J7KZH0 | Er membrane protein complex subunit 1-like isoform x2 protein. | DUF2012 domain-containing protein. | 0.973 |
RF55_3100 | RF55_4365 | A0A0J7L1G5 | A0A0J7KYJ5 | Er membrane protein complex subunit 1-like isoform x2 protein. | Tetratricopeptide repeat protein 35-b. | 0.992 |
RF55_3100 | RF55_4465 | A0A0J7L1G5 | A0A0J7KYG3 | Er membrane protein complex subunit 1-like isoform x2 protein. | ER membrane protein complex subunit 3. | 0.988 |
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