STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_2922Ubiquitin-conjugating enzyme e2 j2-like protein. (167 aa)    
Predicted Functional Partners:
RF55_13110
Ubiquitin-conjugating enzyme e2 g2.
    
 0.956
RF55_4411
Autophagy-related protein 7.
    
 0.918
RF55_1022
Ubiquitin-conjugating enzyme e2 g1; Belongs to the ubiquitin-conjugating enzyme family.
    
0.907
RF55_761
Ubiquitin-like modifier-activating enzyme 1-like protein; Belongs to the ubiquitin-activating E1 family.
    
 0.902
RF55_10027
Ubiquitin-conjugating enzyme e2 j1-like protein.
    
0.892
RF55_2139
E3 ubiquitin-protein ligase march6.
    
 
 0.888
RF55_8072
Ubiquitin-conjugating enzyme e2 w-like protein.
    
 0.884
RF55_6740
Ubiquitin-conjugating enzyme e2 h; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.870
RF55_6500
Nedd8-activating enzyme e1 catalytic subunit.
   
 0.865
RF55_4715
Ubiquitin-conjugating enzyme e2-22 kDa.
    
 0.863
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.