STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_1899Tektin-b1-like isoform x1 protein. (423 aa)    
Predicted Functional Partners:
RF55_8024
Homeobox protein goosecoid.
    
   0.948
RF55_2484
Rib43a-like with coiled-coils protein 2 protein.
   
 
 0.910
RF55_1815
Coiled-coil domain-containing protein mitochondrial-like protein.
   
 
 0.892
RF55_7992
Uncharacterized protein.
   
   0.885
RF55_5796
Wd repeat-containing protein 16.
   
   0.874
RF55_10516
DUF667 domain-containing protein.
   
   0.866
RF55_6834
Ef-hand domain-containing family member c2-like protein.
   
 
 0.833
RF55_9466
Tektin-4-like protein.
  
 
0.756
RF55_4585
Tektin-3-like protein.
  
 
0.744
RF55_22548
Tektin-3-like isoform x3 protein.
  
 
0.738
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.