STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_1470Nucleolar protein 58-like protein. (629 aa)    
Predicted Functional Partners:
RF55_7766
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
RF55_5362
Heat repeat-containing protein 1.
   
 0.999
RF55_3216
Rrna 2-o-methyltransferase fibrillarin.
   
 0.999
RF55_104
Wd repeat-containing protein 43-like protein.
   
 0.999
RF55_26569
Sik1-like protein.
  
0.998
RF55_9200
U3 small nucleolar rna-associated protein 15-like protein.
   
 0.998
RF55_8302
Wd repeat-containing protein 36.
   
 0.998
RF55_2574
Nucleolar protein 56.
  
0.998
RF55_4509
Transducin beta-like protein 3-like protein.
   
 0.998
RF55_731
Cirhin-like protein.
   
 0.998
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.