STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_832Protein kinase c-binding protein nell1. (953 aa)    
Predicted Functional Partners:
RF55_4734
Leucine-rich repeat serine threonine-protein kinase 1-like protein.
   
 0.856
RF55_14435
Suppressor of hairless protein.
    
 0.727
RF55_17797
Muscle m-line assembly protein unc-89.
   
 0.615
RF55_5597
Muscle m-line assembly protein unc-89.
   
 0.615
RF55_3931
Muscle m-line assembly protein unc-89.
   
 0.615
RF55_5912
Xylosyltransferase oxt-like protein.
    
 0.589
RF55_24621
Urea amidolyase.
    
 0.581
RF55_4695
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.581
RF55_20913
Twitchin-like protein.
    
  0.578
RF55_18555
Twitchin-like protein.
    
  0.578
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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