STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_397Protein isoform b. (332 aa)    
Predicted Functional Partners:
RF55_7812
Putative histone-lysine n-methyltransferase ash1l.
     
 0.830
RF55_14495
Histone-lysine n-h3 lysine-79 specific.
    
 0.821
RF55_16326
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.821
RF55_1125
Procollagen--oxoglutarate 5-dioxygenase 3.
    
  0.775
RF55_1127
Procollagen--oxoglutarate 5-dioxygenase 3.
    
  0.775
RF55_4431
Set and mynd domain-containing protein 4.
     
 0.763
RF55_12129
Protein isoform b.
  
  
0.761
RF55_2717
Histone-lysine n-methyltransferase e-like isoform 1 protein.
   
 
 0.743
RF55_17567
Protein isoform a.
     
0.733
RF55_792
Polycomb protein eed-a-like protein.
    
 0.633
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.