STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_18044Alpha beta hydrolase. (138 aa)    
Predicted Functional Partners:
RF55_24621
Urea amidolyase.
  
 
 0.760
RF55_12529
Anthranilate synthase component i.
    
 0.743
RF55_8354
Aspartate aminotransferase.
   
  0.729
RF55_3947
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.698
RF55_15716
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.698
RF55_9744
Hydroxysteroid dehydrogenase-like protein 2 protein.
  
 0.687
RF55_7564
Atp synthase subunit mitochondrial.
    
 0.650
RF55_8591
Putative peroxisomal acyl-coenzyme a oxidase 1.
  
 0.600
RF55_6286
ATP synthase subunit gamma.
   
 0.585
RF55_4406
Succinyl-:3-ketoacid-coenzyme a transferase mitochondrial.
  
 
 0.575
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.