STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_9186Thioredoxin domain-containing protein 3-like protein. (507 aa)    
Predicted Functional Partners:
RF55_11292
Putative sulfite mitochondrial-like protein; Belongs to the cytochrome b5 family.
   
 0.907
RF55_9822
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.851
RF55_1089
Peroxiredoxin 1.
  
 0.823
RF55_1702
Thioredoxin-dependent peroxide mitochondrial.
  
 0.823
RF55_6516
Thioredoxin reductase mitochondrial.
  
 0.816
RF55_25661
Thioredoxin reductase mitochondrial.
  
 0.816
RF55_5787
Cytochrome b5 reductase 4.
  
 0.803
RF55_18991
Thioredoxin reductase.
  
 0.775
RF55_4571
Peroxiredoxin-6.
  
 0.729
RF55_22967
Methionine sulfoxide reductase a.
   
 0.719
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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