STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_7932Enzymatic polyprotein endonuclease reverse. (122 aa)    
Predicted Functional Partners:
RF55_10657
Fanconi anemia group m protein.
    
  0.664
RF55_7861
Retrovirus-related pol polyprotein from transposon.
  
     0.469
RF55_15938
Pol.
  
     0.463
RF55_25153
Pol polyprotein.
  
     0.447
RF55_15300
Retrovirus-like pol polyprotein.
  
     0.436
RF55_11342
Putative histone-binding protein caf1-like protein.
    
  0.433
RF55_18140
Reverse ribonuclease integrase.
  
     0.424
RF55_10371
RT_RNaseH_2 domain-containing protein.
  
     0.420
RF55_23830
RT_RNaseH_2 domain-containing protein.
  
     0.409
RF55_4233
Lin-9-like protein.
    
  0.405
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.