STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_5567Nucleobindin-2-like isoform x1 protein. (585 aa)    
Predicted Functional Partners:
RF55_18718
Membrane-bound transcription factor site-2 protease-like protein.
      
 0.455
RF55_2297
Calumenin.
   
 
 0.440
RF55_2296
Calumenin-B.
   
 
 0.440
RF55_2295
Calumenin.
   
 
 0.440
RF55_2012
Endoplasmin-like protein.
   
 
 0.428
RF55_3046
Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein.
      
 0.404
RF55_13440
Fork head domain-containing protein fd3.
    
  0.402
RF55_11417
Fork head domain-containing protein fd2.
    
  0.402
RF55_10916
Uncharacterized protein.
    
  0.402
RF55_8272
Fork head domain transcription factor slp2.
    
  0.402
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.