STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_5245Protein trachealess. (749 aa)    
Predicted Functional Partners:
RF55_2126
Aryl hydrocarbon receptor nuclear translocator-like protein.
    
0.982
RF55_11316
Egl nine 1-like protein.
    
 0.976
RF55_12300
Ubx domain-containing protein 7-like protein.
    
 0.964
RF55_19448
Transcription elongation factor b polypeptide 1; Belongs to the SKP1 family.
    
 0.902
RF55_6260
Transcription elongation factor b polypeptide 2.
    
 0.894
RF55_8146
Creb-binding protein.
    
 0.886
RF55_1496
Cullin-2; Belongs to the cullin family.
    
 0.868
RF55_3338
Neuronal pas domain-containing protein 2.
    
0.796
RF55_1006
Circadian locomoter output cycles protein kaput.
    
0.796
RF55_13339
Nad-dependent deacetylase sirtuin-7.
    
 0.793
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.