STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_2038Myosin light chain alkali-like isoform x1 protein. (500 aa)    
Predicted Functional Partners:
RF55_10676
Myosin regulatory light chain 2-like protein.
   
 0.994
RF55_10522
Troponin i isoform x16.
   
 0.989
RF55_1436
Suppressor of lurcher protein 1.
   
 0.987
RF55_5933
Neuropilin and tolloid-like protein 2 protein.
   
 0.987
RF55_6842
Long form-like protein.
   
 0.972
RF55_6841
Short form.
   
 0.972
RF55_13604
Troponin t.
   
 0.960
RF55_5140
Troponin t.
   
 0.960
RF55_7788
Peripheral plasma membrane protein cask.
    
 0.955
RF55_4941
Peripheral plasma membrane protein cask-like protein.
    
 0.955
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.