Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF55_1578 | RF55_1794 | A0A0J7L568 | A0A0J7NZN4 | Polyadenylate-binding protein 1. | Lsm14 protein a. | 0.754 |
RF55_1578 | RF55_5759 | A0A0J7L568 | A0A0J7KV29 | Polyadenylate-binding protein 1. | Mrna-decapping enzyme 2. | 0.482 |
RF55_1578 | RF55_5900 | A0A0J7L568 | A0A0J7NN77 | Polyadenylate-binding protein 1. | Protein pat1 1-like protein. | 0.635 |
RF55_1578 | RF55_6006 | A0A0J7L568 | A0A0J7KTU2 | Polyadenylate-binding protein 1. | Atp-dependent rna helicase me31b; Belongs to the DEAD box helicase family. | 0.815 |
RF55_1578 | RF55_9232 | A0A0J7L568 | A0A0J7KKZ4 | Polyadenylate-binding protein 1. | Enhancer of mrna-decapping protein 3. | 0.493 |
RF55_1725 | RF55_1794 | A0A0J7NZV0 | A0A0J7NZN4 | Centrosomal protein. | Lsm14 protein a. | 0.838 |
RF55_1725 | RF55_6006 | A0A0J7NZV0 | A0A0J7KTU2 | Centrosomal protein. | Atp-dependent rna helicase me31b; Belongs to the DEAD box helicase family. | 0.755 |
RF55_1794 | RF55_1578 | A0A0J7NZN4 | A0A0J7L568 | Lsm14 protein a. | Polyadenylate-binding protein 1. | 0.754 |
RF55_1794 | RF55_1725 | A0A0J7NZN4 | A0A0J7NZV0 | Lsm14 protein a. | Centrosomal protein. | 0.838 |
RF55_1794 | RF55_3238 | A0A0J7NZN4 | A0A0J7L1X1 | Lsm14 protein a. | Chromodomain-helicase-dna-binding protein 1. | 0.838 |
RF55_1794 | RF55_4345 | A0A0J7NZN4 | A0A0J7KYL4 | Lsm14 protein a. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.770 |
RF55_1794 | RF55_4572 | A0A0J7NZN4 | A0A0J7KY67 | Lsm14 protein a. | Chromodomain-helicase-dna-binding protein 7. | 0.838 |
RF55_1794 | RF55_5759 | A0A0J7NZN4 | A0A0J7KV29 | Lsm14 protein a. | Mrna-decapping enzyme 2. | 0.967 |
RF55_1794 | RF55_5900 | A0A0J7NZN4 | A0A0J7NN77 | Lsm14 protein a. | Protein pat1 1-like protein. | 0.777 |
RF55_1794 | RF55_6006 | A0A0J7NZN4 | A0A0J7KTU2 | Lsm14 protein a. | Atp-dependent rna helicase me31b; Belongs to the DEAD box helicase family. | 0.995 |
RF55_1794 | RF55_9232 | A0A0J7NZN4 | A0A0J7KKZ4 | Lsm14 protein a. | Enhancer of mrna-decapping protein 3. | 0.961 |
RF55_1794 | RF55_9956 | A0A0J7NZN4 | A0A0J7KJA6 | Lsm14 protein a. | Chromodomain-helicase-dna-binding protein 1. | 0.838 |
RF55_3238 | RF55_1794 | A0A0J7L1X1 | A0A0J7NZN4 | Chromodomain-helicase-dna-binding protein 1. | Lsm14 protein a. | 0.838 |
RF55_3238 | RF55_6006 | A0A0J7L1X1 | A0A0J7KTU2 | Chromodomain-helicase-dna-binding protein 1. | Atp-dependent rna helicase me31b; Belongs to the DEAD box helicase family. | 0.755 |
RF55_3238 | RF55_9956 | A0A0J7L1X1 | A0A0J7KJA6 | Chromodomain-helicase-dna-binding protein 1. | Chromodomain-helicase-dna-binding protein 1. | 0.896 |
page 1 of 3