STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF55_1458Tetraspanin. (207 aa)    
Predicted Functional Partners:
RF55_15431
Ryanodine receptor-like protein.
   
 
 0.751
RF55_9645
Integrin beta; Belongs to the integrin beta chain family.
    
 0.623
RF55_8214
Integrin beta-ps.
    
 0.623
RF55_2651
Integrin beta; Belongs to the integrin beta chain family.
    
 0.623
RF55_8605
Integrin alpha-ps4; Belongs to the integrin alpha chain family.
    
 0.609
RF55_8604
Integrin alpha-ps4.
    
 0.609
RF55_4687
Integrin alpha-ps1; Belongs to the integrin alpha chain family.
    
 0.609
RF55_10008
Integrin alpha-ps2; Belongs to the integrin alpha chain family.
    
 0.609
RF55_2121
Multiple epidermal growth factor-like domains 10 protein.
     
 0.547
RF55_2636
Bullous pemphigoid antigen isoforms 6 9 10.
     
 0.534
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.