Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD38291.1 | ARD38292.1 | B6E78_01680 | B6E78_01685 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.669 |
ARD38291.1 | ARD38293.1 | B6E78_01680 | B6E78_01690 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |
ARD38291.1 | ARD40059.1 | B6E78_01680 | B6E78_12350 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
ARD38291.1 | ARD40843.1 | B6E78_01680 | B6E78_01675 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.423 |
ARD38291.1 | rpoA | B6E78_01680 | B6E78_09445 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.635 |
ARD38291.1 | slyA | B6E78_01680 | B6E78_03115 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | SlyA family transcriptional regulator; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | 0.434 |
ARD38292.1 | ARD38291.1 | B6E78_01685 | B6E78_01680 | DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.669 |
ARD38292.1 | ARD38293.1 | B6E78_01685 | B6E78_01690 | DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
ARD38293.1 | ARD38291.1 | B6E78_01690 | B6E78_01680 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |
ARD38293.1 | ARD38292.1 | B6E78_01690 | B6E78_01685 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
ARD40059.1 | ARD38291.1 | B6E78_12350 | B6E78_01680 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
ARD40843.1 | ARD38291.1 | B6E78_01675 | B6E78_01680 | Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
rpoA | ARD38291.1 | B6E78_09445 | B6E78_01680 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.635 |
slyA | ARD38291.1 | B6E78_03115 | B6E78_01680 | SlyA family transcriptional regulator; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |