Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD38529.1 | ARD40875.1 | B6E78_03155 | B6E78_05405 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
ARD38903.1 | ARD40875.1 | B6E78_05400 | B6E78_05405 | Transcriptional regulator LrhA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
ARD38904.1 | ARD40875.1 | B6E78_05410 | B6E78_05405 | Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.844 |
ARD40875.1 | ARD38529.1 | B6E78_05405 | B6E78_03155 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
ARD40875.1 | ARD38903.1 | B6E78_05405 | B6E78_05400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator LrhA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
ARD40875.1 | ARD38904.1 | B6E78_05405 | B6E78_05410 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.844 |
ARD40875.1 | selA | B6E78_05405 | B6E78_08995 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis; Belongs to the SelA family. | 0.402 |
selA | ARD40875.1 | B6E78_08995 | B6E78_05405 | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis; Belongs to the SelA family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |