A0A1B0B101 protein (Glossina palpalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1B0B101

Uncharacterized protein. (963 aa)

Predicted Functional Partners:

A0A1B0AVK6

0.982

A0A1B0AZ38

0.677

A0A1B0AKZ0

0.665

A0A1B0AV32

0.665

A0A1B0BWY9

0.665

A0A1B0APP5

0.624

A0A1B0C531

0.616

A0A1B0AYR2

0.590

A0A1B0BJA8

0.590

A0A1B0C3H7

0.583

Your Current Organism:

Glossina palpalis

NCBI taxonomy Id: 67801
Other names: G. palpalis gambiensis, Glossina palpalis gambiensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1B0AKZ0	A0A1B0B101	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.665
A0A1B0APP5	A0A1B0B101	Protein kinase domain-containing protein.	Uncharacterized protein.	0.624
A0A1B0AV32	A0A1B0B101	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.665
A0A1B0AVK6	A0A1B0B101	DPH-type MB domain-containing protein.	Uncharacterized protein.	0.982
A0A1B0AVK6	A0A1B0C3H7	DPH-type MB domain-containing protein.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.408
A0A1B0AYR2	A0A1B0AZ38	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1B0AYR2	A0A1B0B101	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A1B0AZ38	A0A1B0AYR2	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1B0AZ38	A0A1B0B101	Uncharacterized protein.	Uncharacterized protein.	0.677
A0A1B0AZ38	A0A1B0BJA8	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1B0B101	A0A1B0AKZ0	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.665
A0A1B0B101	A0A1B0APP5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.624
A0A1B0B101	A0A1B0AV32	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.665
A0A1B0B101	A0A1B0AVK6	Uncharacterized protein.	DPH-type MB domain-containing protein.	0.982
A0A1B0B101	A0A1B0AYR2	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A1B0B101	A0A1B0AZ38	Uncharacterized protein.	Uncharacterized protein.	0.677
A0A1B0B101	A0A1B0BJA8	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A1B0B101	A0A1B0BWY9	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.665
A0A1B0B101	A0A1B0C3H7	Uncharacterized protein.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.583
A0A1B0B101	A0A1B0C531	Uncharacterized protein.	FHA domain-containing protein.	0.616